Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | PC1_RS04705 | Not Available | Positive | 1091253 - 1092104 | 30464.7 |
| ump kinase | PC1_RS04710 | Not Available | Positive | 1092261 - 1092986 | 26001.7 |
| ribosome recycling factor | PC1_RS04715 | Not Available | Positive | 1093112 - 1093669 | 20654.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PC1_RS04720 | Not Available | Positive | 1093909 - 1095105 | 42686.3 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | PC1_RS04725 | Not Available | Positive | 1095305 - 1096066 | 28444.8 |
| phosphatidate cytidylyltransferase | PC1_RS04730 | Not Available | Positive | 1096076 - 1096933 | 31249.4 |
| sigma e protease regulator rsep | PC1_RS04735 | Not Available | Positive | 1096955 - 1098310 | 49150.2 |
| outer membrane protein assembly factor bama | PC1_RS04740 | Not Available | Positive | 1098346 - 1100775 | 88905.3 |
| molecular chaperone skp | PC1_RS04745 | Not Available | Positive | 1100918 - 1101415 | 18354.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | PC1_RS04750 | Not Available | Positive | 1101419 - 1102441 | 35799.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
