Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | PC1_RS04650 | Not Available | Negative | 1080987 - 1081835 | 32335.0 |
| secy-interacting protein | PC1_RS04655 | Not Available | Positive | 1081906 - 1082454 | 20260.2 |
| yqcc family protein | PC1_RS04665 | Not Available | Positive | 1083237 - 1083587 | 13309.7 |
| trna pseudouridine(65) synthase truc | PC1_RS04670 | Not Available | Positive | 1083580 - 1084365 | 29807.7 |
| flavodoxin | PC1_RS04675 | Not Available | Positive | 1084444 - 1084899 | 16446.4 |
| duf3461 family protein | PC1_RS04680 | Not Available | Negative | 1084973 - 1085362 | 15226.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | PC1_RS04685 | Not Available | Negative | 1085641 - 1086468 | 30054.9 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | PC1_RS04690 | Not Available | Negative | 1086497 - 1089211 | 104380.0 |
| type i methionyl aminopeptidase | PC1_RS04695 | Not Available | Negative | 1089253 - 1090047 | 29194.3 |
| 30s ribosomal protein s2 | PC1_RS04700 | Not Available | Positive | 1090393 - 1091118 | 26698.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
