Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | PC1_RS04600 | Not Available | Positive | 1069912 - 1072170 | 83865.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | PC1_RS04605 | Not Available | Positive | 1072239 - 1073051 | 29001.0 |
| cysteine desulfurase sulfur acceptor subunit csde | PC1_RS04610 | Not Available | Negative | 1073088 - 1073543 | 16828.0 |
| cysteine desulfurase csda | PC1_RS04615 | Not Available | Negative | 1073547 - 1074752 | 43158.6 |
| ygdi/ygdr family lipoprotein | PC1_RS04620 | Not Available | Positive | 1074936 - 1075157 | 8060.68 |
| transcriptional regulator gcva | PC1_RS04625 | Not Available | Positive | 1075695 - 1076618 | 34521.3 |
| duf423 domain-containing protein | PC1_RS04630 | Not Available | Positive | 1076758 - 1077153 | 14501.1 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | PC1_RS04635 | Not Available | Positive | 1077146 - 1078246 | 42125.8 |
| flap endonuclease xni | PC1_RS04640 | Not Available | Negative | 1078303 - 1079085 | 28634.2 |
| nucleotide 5'-monophosphate nucleosidase ppnn | PC1_RS04645 | Not Available | Negative | 1079165 - 1080529 | 50385.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
