Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | PC1_RS04400 | Not Available | Negative | 1025535 - 1026641 | 41754.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | PC1_RS04405 | Not Available | Positive | 1026807 - 1027526 | 27153.9 |
| yggl family protein | PC1_RS04410 | Not Available | Positive | 1027528 - 1027872 | 13449.0 |
| duf2884 domain-containing protein | PC1_RS04415 | Not Available | Positive | 1028047 - 1028760 | 26519.8 |
| phosphonate metabolism transcriptional regulator phnf | PC1_RS04420 | Not Available | Positive | 1029049 - 1029762 | 26925.6 |
| phosphonate c-p lyase system protein phng | PC1_RS04425 | Not Available | Positive | 1029763 - 1030209 | 16712.2 |
| phosphonate c-p lyase system protein phnh | PC1_RS04430 | Not Available | Positive | 1030209 - 1030784 | 20429.5 |
| carbon-phosphorus lyase complex subunit phni | PC1_RS04435 | Not Available | Positive | 1030784 - 1031860 | 39927.2 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | PC1_RS04440 | Not Available | Positive | 1031853 - 1032707 | 32568.8 |
| phosphonate c-p lyase system protein phnk | PC1_RS04445 | Not Available | Positive | 1032694 - 1033458 | 28358.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
