Dickeya chrysanthemi Ech1591

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya chrysanthemi Ech1591 is a Gram-negative bacterium characterized by its rod-shaped morphology and aerobic oxygen requirements. This organism possesses flagella, which contribute to its motility in various environments. It has a single replicon, indicating a streamlined genomic structure that is typical for many bacterial species. The accession number for Dickeya chrysanthemi Ech1591 is NC_012912.1, which provides a reference for genomic studies and comparisons within the context of microbial research. This bacterium is part of a genus known for its plant pathogenicity, particularly affecting species such as chrysanthemums, which has implications for agricultural practices. From a biological perspective, the presence of flagella allows Dickeya chrysanthemi Ech1591 to navigate its environment effectively, which may enhance its survival and pathogenic capabilities. The aerobic nature of this bacterium suggests that it thrives in oxygen-rich environments, potentially influencing its distribution and interaction with host plants. Understanding these traits can provide insights into the ecological roles of Dickeya chrysanthemi and its impact on plant health, highlighting the importance of monitoring and managing this pathogen in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya chrysanthemi
StrainEch1591

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Dickeya chrysanthemi Ech1591
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya chrysanthemi Ech1591, complete sequence.

Gene Summary

Adenine Count

1094482 bp

Thymine Count

1094991 bp

Guanine Count

1318509 bp

Cytosine Count

1305872 bp

Genome Length

4813854 bp

Protein-coding Genes

4132 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recqDD1591_RS01015Not AvailablePositive233016 - 23486068612.8
threonine export protein rhtcDD1591_RS01020Not AvailablePositive234922 - 23554522898.8
homoserine/homoserine lactone efflux proteinDD1591_RS01025Not AvailableNegative235635 - 23625522534.4
lysophospholipase l2DD1591_RS01030Not AvailablePositive236367 - 23735937995.7
sugar/pyridoxal phosphate phosphatase yiglDD1591_RS01035Not AvailablePositive237412 - 23820930136.0
glycerophosphodiester phosphodiesteraseDD1591_RS01040Not AvailableNegative238200 - 23928240584.3
glycerol-3-phosphate transporterDD1591_RS01045Not AvailableNegative239427 - 24077650042.0
anaerobic glycerol-3-phosphate dehydrogenase subunit aDD1591_RS01050Not AvailablePositive241076 - 24271959316.0
glycerol-3-phosphate dehydrogenase subunit glpbDD1591_RS01055Not AvailablePositive242709 - 24395943945.0
anaerobic glycerol-3-phosphate dehydrogenase subunit glpcDD1591_RS01060Not AvailablePositive243956 - 24515844919.4

Displaying genes 301 – 310 of 4307 in total

Metabolites

1806 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1806 metabolites

Health Effects

No health effects information available for this bacterium.