Dickeya chrysanthemi Ech1591

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya chrysanthemi Ech1591 is a Gram-negative bacterium characterized by its rod-shaped morphology and aerobic oxygen requirements. This organism possesses flagella, which contribute to its motility in various environments. It has a single replicon, indicating a streamlined genomic structure that is typical for many bacterial species. The accession number for Dickeya chrysanthemi Ech1591 is NC_012912.1, which provides a reference for genomic studies and comparisons within the context of microbial research. This bacterium is part of a genus known for its plant pathogenicity, particularly affecting species such as chrysanthemums, which has implications for agricultural practices. From a biological perspective, the presence of flagella allows Dickeya chrysanthemi Ech1591 to navigate its environment effectively, which may enhance its survival and pathogenic capabilities. The aerobic nature of this bacterium suggests that it thrives in oxygen-rich environments, potentially influencing its distribution and interaction with host plants. Understanding these traits can provide insights into the ecological roles of Dickeya chrysanthemi and its impact on plant health, highlighting the importance of monitoring and managing this pathogen in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya chrysanthemi
StrainEch1591

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Dickeya chrysanthemi Ech1591
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya chrysanthemi Ech1591, complete sequence.

Gene Summary

Adenine Count

1094482 bp

Thymine Count

1094991 bp

Guanine Count

1318509 bp

Cytosine Count

1305872 bp

Genome Length

4813854 bp

Protein-coding Genes

4132 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-serNot AvailableNot AvailablePositive1389362 - 1389449Not Available
hypothetical proteinDD1591_RS06150Not AvailableNegative1389552 - 138994114504.5
helix-turn-helix domain-containing proteinDD1591_RS06155Not AvailableNegative1390103 - 13903609459.63
is5 family transposaseDD1591_RS21410Not AvailableNegative1390761 - 139160531781.8
acyltransferaseDD1591_RS06170Not AvailableNegative1391748 - 139290543807.3
amino acid abc transporter permeaseDD1591_RS06180Not AvailablePositive1393486 - 139463540999.3
isochorismatase family proteinDD1591_RS06185Not AvailablePositive1394914 - 139543819274.0
duf4186 domain-containing proteinDD1591_RS06190Not AvailableNegative1395449 - 139582314282.1
universal stress proteinDD1591_RS06195Not AvailablePositive1396033 - 139646115560.8
dksa/trar family c4-type zinc finger proteinDD1591_RS06200Not AvailableNegative1396510 - 13967769636.25

Displaying genes 1351 – 1360 of 4307 in total

Metabolites

1806 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1806 metabolites

Health Effects

No health effects information available for this bacterium.