Laribacter hongkongensis HLHK9

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Aquaspirillaceae

Genus

Laribacter

Description

Laribacter hongkongensis HLHK9 is a Gram-negative, anaerobic bacterium characterized by its bacilli shape and the presence of flagella. It is non-motile and displays a mesophilic temperature range, indicating optimal growth at moderate temperatures. This organism is free-living and has a single replicon, as well as a double membrane structure. The pathogenicity of Laribacter hongkongensis HLHK9 is a notable trait, suggesting that it can be associated with diseases or health issues in its host. Its habitat is primarily host-associated, which implies a specific ecological niche that may influence its interactions with host organisms. Given its nonsporulating nature, L. hongkongensis HLHK9 may rely on other survival strategies in varying environmental conditions. The combination of its anaerobic requirement and mesophilic growth aligns with the adaptive strategies of many gut-associated microorganisms, which often thrive in low-oxygen environments. Overall, Laribacter hongkongensis HLHK9 exemplifies a complex relationship with its host, potentially contributing to both health and disease. Understanding such traits can provide insights into the ecological roles of bacteria in host-associated environments and their implications for human health. Further studies may explore its specific interactions and the mechanisms underlying its pathogenicity. The accession number for this strain is NC_012559.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyAquaspirillaceae
GenusLaribacter
SpeciesLaribacter hongkongensis
StrainHLHK9

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Laribacter hongkongensis HLHK9
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Laribacter hongkongensis HLHK9, complete sequence.

Gene Summary

Adenine Count

596540 bp

Thymine Count

596639 bp

Guanine Count

988227 bp

Cytosine Count

987923 bp

Genome Length

3169329 bp

Protein-coding Genes

2891 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4390 domain-containing proteinLHK_RS00285Not AvailableNegative55229 - 5584622896.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbLHK_RS00290Q87KD3Negative55824 - 5708046318.4
zinc metalloprotease htpxLHK_RS00295B2JJU6Negative57137 - 5800631379.3
lyttr family dna-binding domain-containing proteinLHK_RS00300Q87K77Negative58125 - 5883526081.5
response regulatorLHK_RS00305Not AvailableNegative58823 - 6052063992.4
uvrd-helicase domain-containing proteinLHK_RS00310P03018Negative60528 - 6266078331.4
enoyl-coa hydratase/isomerase family proteinLHK_RS00315P76082Positive62803 - 6348024329.4
pseudouridine synthaseLHK_RS00320P45124Positive63559 - 6425425505.8
sodium-dependent transporterLHK_RS00325Not AvailableNegative64516 - 6588048361.4
heme biosynthesis hemy n-terminal domain-containing proteinLHK_RS00330Not AvailableNegative66093 - 6730144755.1

Displaying genes 311 – 320 of 3167 in total

Metabolites

2146 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 2146 metabolites

Health Effects

No health effects information available for this bacterium.