Laribacter hongkongensis HLHK9

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Aquaspirillaceae

Genus

Laribacter

Description

Laribacter hongkongensis HLHK9 is a Gram-negative, anaerobic bacterium characterized by its bacilli shape and the presence of flagella. It is non-motile and displays a mesophilic temperature range, indicating optimal growth at moderate temperatures. This organism is free-living and has a single replicon, as well as a double membrane structure. The pathogenicity of Laribacter hongkongensis HLHK9 is a notable trait, suggesting that it can be associated with diseases or health issues in its host. Its habitat is primarily host-associated, which implies a specific ecological niche that may influence its interactions with host organisms. Given its nonsporulating nature, L. hongkongensis HLHK9 may rely on other survival strategies in varying environmental conditions. The combination of its anaerobic requirement and mesophilic growth aligns with the adaptive strategies of many gut-associated microorganisms, which often thrive in low-oxygen environments. Overall, Laribacter hongkongensis HLHK9 exemplifies a complex relationship with its host, potentially contributing to both health and disease. Understanding such traits can provide insights into the ecological roles of bacteria in host-associated environments and their implications for human health. Further studies may explore its specific interactions and the mechanisms underlying its pathogenicity. The accession number for this strain is NC_012559.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyAquaspirillaceae
GenusLaribacter
SpeciesLaribacter hongkongensis
StrainHLHK9

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Laribacter hongkongensis HLHK9
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Laribacter hongkongensis HLHK9, complete sequence.

Gene Summary

Adenine Count

596540 bp

Thymine Count

596639 bp

Guanine Count

988227 bp

Cytosine Count

987923 bp

Genome Length

3169329 bp

Protein-coding Genes

2891 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate reductase cytochrome c-type subunitLHK_RS09470Q8VU46Positive1970363 - 197080316139.2
napc/nirt family cytochrome cLHK_RS09475P0ABL7Positive1970827 - 197145323484.8
cytochrome c biogenesis heme-transporting atpase ccmaLHK_RS09480Q82WC8Positive1971607 - 197221522065.8
heme exporter protein ccmbLHK_RS09485Q9I3N6Positive1972212 - 197288323535.7
heme abc transporter permease ccmcLHK_RS09490Q9I3N5Positive1972894 - 197363728008.1
heme exporter protein ccmdLHK_RS09495Not AvailablePositive1973634 - 19738859242.03
cytochrome c maturation protein ccmeLHK_RS09500C1D9H2Positive1973869 - 197430915676.0
heme lyase ccmf/nrfe family subunitLHK_RS09505Q9I3N2Positive1974309 - 197624069088.9
dsbe family thiol:disulfide interchange proteinLHK_RS09510Q46476Positive1976237 - 197678220143.4
cytochrome c-type biogenesis proteinLHK_RS09515P45405Positive1976779 - 197727018255.9

Displaying genes 2051 – 2060 of 3167 in total

Metabolites

2146 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 2146 metabolites

Health Effects

No health effects information available for this bacterium.