Anaplasma marginale str. Florida

Gram-negativeCocciNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Anaplasmataceae

Genus

Anaplasma

Description

Anaplasma marginale is the most prevalent tick-borne pathogen of cattle. It is transmitted by ixodid ticks. Symptoms of acute disease are anemia, weight loss, and often death. A.marginale establishes life-long persistent infection in animals that survive disease. These animals are clinically healthy but serve as reservoirs for transmission of the pathogen. Sequencing has revealed a small genome size due to reductive evolution, and it is related to several other intracellular pathogens, including those in the genera Ehrlichia, and Rickettsia. The Florida strain was originally isolated from a pool of blood samples collected from cattle in 1955. It is not able to be transmitted by the tick Dermacentor andersoni. It has been passed continuously since isolation. Comparisons between 2 fully sequenced genomes (strains St. Maries and Florida) and 3 unfinished genomes (two tick transmissible strains; Virginia and Puerto Rico, and one D.andersoni non-transmissible strain, Mississippi) showed that A. marginale has a closed-core genome with few highly plastic regions, which include the msp2 and msp3 genes, as well as the aaap locus. This means that few to no new genes are expected to be found when new genomes are sequenced. It has however a medium level of single-nucleotide polymorphisms (SNPs), having at least 20,028 variable sites found among these five genomes which is approximately 1.67% of the estimated size of the pan-genome. (HAMAP: ANAMF)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyAnaplasmataceae
GenusAnaplasma
SpeciesAnaplasma marginale
StrainFlorida

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Anaplasma marginale str. Florida
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Cow- Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Anaplasma marginale str. Florida

Accession NumberNC_012026.1

Gene Summary

Adenine Count

302478 bp

Thymine Count

301451 bp

Guanine Count

296243 bp

Cytosine Count

302263 bp

Genome Length

1202435 bp

Protein-coding Genes

951 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAMF_RS05070Not Available+13 - 190569862.3
5-(carboxyamino)imidazole ribonucleotide mutaseAMF_RS05075Not Available-1862 - 232916010.5
tlpa family protein disulfide reductaseAMF_RS05080Not Available-2355 - 295721613.5
rod shape-determining protein rodaAMF_RS05085Not Available+3113 - 418339070.2
integration host factor subunit alphaAMF_RS05090Not Available+4258 - 455411031.6
merr family transcriptional regulatorAMF_RS10160Not Available+4551 - 492514681.1
Trna-proNot AvailableNot Available+4916 - 4993Not Available
hypothetical proteinAMF_RS05100Not Available-5187 - 612233102.2
hypothetical proteinAMF_RS05105Not Available-6212 - 662215189.5
Trna-serNot AvailableNot Available+6825 - 6911Not Available

Displaying genes 1 – 10 of 995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

33 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da

Displaying 1–10 of 33 metabolites