Desulfatibacillum aliphaticivorans

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfatibacillaceae

Genus

Desulfatibacillum

Description

Desulfatibacillum aliphaticivorans is a Gram-negative, non-motile bacterium characterized by its rod shape and anaerobic lifestyle. This organism thrives in mesophilic conditions, with an optimal growth temperature of 32°C. It is notable for having a single replicon and is classified as non-spore-forming, indicating that it does not produce spores as a means of survival. As a member of the microbial community, D. aliphaticivorans plays a significant role in the biogeochemical cycles, particularly in the degradation of aliphatic hydrocarbons. Its anaerobic metabolism is essential for the breakdown of these compounds, contributing to the carbon cycle and influencing the ecological dynamics in environments where such hydrocarbons are present. The presence of D. aliphaticivorans in specific habitats underscores the importance of anaerobic bacteria in the degradation process of organic pollutants. This organism’s adaptations allow it to thrive in environments where oxygen is scarce, highlighting its ecological significance in anaerobic ecosystems. The study of D. aliphaticivorans can provide insights into bioremediation strategies, especially in polluted areas, as it demonstrates the potential of anaerobic bacteria to contribute to the detoxification of harmful compounds.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfatibacillaceae
GenusDesulfatibacillum
SpeciesDesulfatibacillum aliphaticivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfatibacillum aliphaticivorans, complete sequence.

Gene Summary

Adenine Count

1481619 bp

Thymine Count

1484653 bp

Guanine Count

1766858 bp

Cytosine Count

1783943 bp

Genome Length

6517073 bp

Protein-coding Genes

5280 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit delta'DALK_RS00125Not AvailablePositive34706 - 3569835672.1
stage 0 sporulation family proteinDALK_RS00130Not AvailablePositive35699 - 3683542424.1
methionine--trna ligaseDALK_RS00135Not AvailablePositive36880 - 3881172662.4
penicillin-binding transpeptidase domain-containing proteinDALK_RS00140Not AvailablePositive38814 - 4013048991.7
hypothetical proteinDALK_RS00145Not AvailablePositive40450 - 4081814061.2
arac family transcriptional regulatorDALK_RS27205Not AvailablePositive40937 - 4204041476.2
alpha/beta fold hydrolaseDALK_RS00155Not AvailablePositive42983 - 45679103064.0
mg-chelatase subunit chli-like proteinDALK_RS30065Not AvailablePositive45698 - 4636024099.2
type ii toxin-antitoxin system hicb family antitoxinDALK_RS00165Not AvailablePositive46489 - 467439630.49
type ii toxin-antitoxin system hica family toxinDALK_RS30550Not AvailablePositive46706 - 468947251.83

Displaying genes 61 – 70 of 5365 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da

Displaying 1–10 of 88 metabolites

Health Effects

No health effects information available for this bacterium.