Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EC55989_RS01085 | P75672 | Positive | 237008 - 237730 | 27272.7 |
| ribonuclease hi | EC55989_RS01090 | B7LHC0 | Negative | 237727 - 238194 | 17570.9 |
| dna polymerase iii subunit epsilon | EC55989_RS01095 | P03007 | Positive | 238259 - 238990 | 27101.5 |
| Trna-asp | Not Available | Not Available | Positive | 239123 - 239199 | Not Available |
| aminopeptidase | EC55989_RS01105 | P77339 | Positive | 239526 - 240311 | 29591.2 |
| protein ykfm | EC55989_RS01110 | A5A605 | Negative | 240448 - 240927 | 18146.9 |
| hypothetical protein | EC55989_RS01115 | P77354 | Negative | 240937 - 241851 | 34023.4 |
| hcp family type vi secretion system effector | EC55989_RS01120 | P46855 | Negative | 241895 - 242377 | 18028.6 |
| hypothetical protein | EC55989_RS01125 | Not Available | Negative | 242304 - 243753 | 54287.8 |
| type vi secretion system membrane subunit tssm | EC55989_RS01130 | Q9I755 | Negative | 243764 - 247198 | 130829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





