Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase ldcc | EC55989_RS00930 | P52095 | Positive | 208944 - 211085 | 80594.9 |
| voc family protein | EC55989_RS00935 | P52096 | Positive | 211142 - 211531 | 14707.4 |
| trna lysidine(34) synthetase tils | EC55989_RS00940 | Q7UDQ6 | Positive | 211596 - 212894 | 47934.6 |
| rho-binding antiterminator | EC55989_RS00945 | P0AFW8 | Negative | 212943 - 213203 | 9698.45 |
| yaep family protein | EC55989_RS00950 | A7ZHT0 | Negative | 213190 - 213390 | 7214.59 |
| yaeq family protein | EC55989_RS00955 | P0AA97 | Positive | 213556 - 214101 | 20877.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | EC55989_RS00960 | P40711 | Positive | 214098 - 214520 | 15577.9 |
| envelope stress response activation lipoprotein nlpe | EC55989_RS00965 | P40710 | Positive | 214534 - 215244 | 25855.7 |
| is110-like element is621 family transposase | EC55989_RS00970 | Not Available | Positive | 215494 - 216474 | 36559.1 |
| hypothetical protein | EC55989_RS00980 | P37056 | Negative | 216678 - 217501 | 29921.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





