Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter mdtm | EC55989_RS25440 | Q8XB84 | Negative | 5085983 - 5087215 | 44582.0 |
| rpn family recombination-promoting nuclease/putative transposase | EC55989_RS25445 | B7NGZ6 | Positive | 5087682 - 5088638 | 37342.1 |
| plp-dependent aminotransferase family protein | EC55989_RS25450 | P39389 | Negative | 5088881 - 5090293 | 53092.9 |
| duf1127 domain-containing protein | EC55989_RS25455 | P39390 | Positive | 5090470 - 5090634 | 6838.34 |
| hypothetical protein | EC55989_RS25460 | Not Available | Positive | 5090731 - 5091613 | 33848.6 |
| duf1524 domain-containing protein | EC55989_RS27770 | Not Available | Positive | 5091661 - 5092824 | 45319.9 |
| endoribonuclease syme | EC55989_RS25470 | B7LDZ6 | Negative | 5092871 - 5093212 | 12294.8 |
| restriction endonuclease subunit s | EC55989_RS25475 | P19704 | Negative | 5093433 - 5095169 | 66023.4 |
| type i restriction-modification system subunit m | EC55989_RS25480 | Q47282 | Negative | 5095169 - 5096638 | 55232.6 |
| ecoai/ftnuii family type i restriction enzme subunit r | EC55989_RS25485 | Q07736 | Negative | 5096705 - 5099137 | 92076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





