Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease dtpc | EC55989_RS23600 | P39276 | Negative | 4739204 - 4740661 | 53085.8 |
| lysine decarboxylase cada | EC55989_RS23605 | P0A9H4 | Negative | 4740720 - 4742867 | 81264.7 |
| cadaverine/lysine antiporter | EC55989_RS23610 | P0AAF0 | Negative | 4742947 - 4744281 | 46667.8 |
| lysine decarboxylation/transport transcriptional activator cadc | EC55989_RS23615 | P23890 | Negative | 4744647 - 4746185 | 57830.1 |
| hypothetical protein | EC55989_RS30020 | Not Available | Negative | 4746445 - 4746559 | 4468.34 |
| duf4942 domain-containing protein | EC55989_RS23625 | Not Available | Negative | 4746934 - 4747776 | 32680.4 |
| duf957 domain-containing protein | EC55989_RS23630 | Not Available | Negative | 4747861 - 4748058 | 7507.9 |
| duf5983 family protein | EC55989_RS23635 | Not Available | Negative | 4748078 - 4748566 | 18110.5 |
| ta system toxin cbta family protein | EC55989_RS23640 | Not Available | Negative | 4748563 - 4748940 | 13972.6 |
| type iv toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin cbea | EC55989_RS23645 | Not Available | Negative | 4748987 - 4749364 | 13731.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





