Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme yjbq | EC55989_RS23230 | P0AF49 | Positive | 4662124 - 4662540 | 15669.8 |
| mmcq/yjbr family dna-binding protein | EC55989_RS23235 | P0AF51 | Positive | 4662544 - 4662900 | 13520.2 |
| excinuclease abc subunit uvra | EC55989_RS23240 | P0A698 | Negative | 4662935 - 4665757 | 103874.0 |
| single-stranded dna-binding protein ssb1 | EC55989_RS23245 | P0AGE2 | Positive | 4666011 - 4666547 | 18976.1 |
| yjcb family protein | EC55989_RS23250 | P32700 | Negative | 4666646 - 4666927 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | EC55989_RS23255 | P32701 | Positive | 4667357 - 4668943 | 60834.8 |
| superoxide response transcriptional regulator soxs | EC55989_RS23260 | P0A9E4 | Negative | 4668946 - 4669269 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EC55989_RS23265 | P0ACS3 | Positive | 4669355 - 4669819 | 17150.7 |
| guanine/hypoxanthine transporter ghxp | EC55989_RS23270 | P0AF53 | Positive | 4670365 - 4671714 | 45783.5 |
| na+/h+ antiporter | EC55989_RS23275 | P32703 | Positive | 4671865 - 4673514 | 60527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





