Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | EC55989_RS22975 | A7ZUM6 | Positive | 4603712 - 4604641 | 35701.2 |
| malate synthase a | EC55989_RS22980 | P08997 | Positive | 4604910 - 4606511 | 60296.0 |
| isocitrate lyase | EC55989_RS22985 | P0A9G7 | Positive | 4606541 - 4607845 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EC55989_RS22990 | A7ZUN0 | Positive | 4608126 - 4609862 | 67674.3 |
| shet2/espl2 family type iii secretion system effector toxin | EC55989_RS22995 | P23325 | Negative | 4609831 - 4611405 | 60154.4 |
| glyoxylate bypass operon transcriptional repressor iclr | EC55989_RS23000 | P16528 | Negative | 4611722 - 4612546 | 29741.1 |
| methionine synthase | EC55989_RS23005 | P13009 | Positive | 4612746 - 4616429 | 136005.0 |
| na/pi cotransporter family protein | EC55989_RS23010 | P0AF43 | Positive | 4616649 - 4618280 | 59470.7 |
| dipeptidase pepe | EC55989_RS23015 | A7ZUN5 | Negative | 4618371 - 4619060 | 24571.7 |
| 23s rrna pseudouridine(2604) synthase rluf | EC55989_RS23020 | Q8X4L9 | Positive | 4619272 - 4620144 | 32434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





