Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator rhar | EC55989_RS22385 | Q0SZ96 | Positive | 4480400 - 4481248 | 32315.3 |
| l-rhamnose/proton symporter rhat | EC55989_RS22390 | B7L9F9 | Negative | 4481245 - 4482279 | 37288.1 |
| superoxide dismutase | EC55989_RS22395 | P66828 | Positive | 4482564 - 4483184 | 23080.2 |
| hypothetical protein | EC55989_RS22405 | A7ZUC3 | Positive | 4483444 - 4484425 | 33812.8 |
| 6-hydroxyaminopurine reductase | EC55989_RS22410 | P32157 | Positive | 4484574 - 4485248 | 25344.1 |
| envelope stress sensor histidine kinase cpxa | EC55989_RS22415 | P0AE84 | Negative | 4485354 - 4486727 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | EC55989_RS22420 | P0AE89 | Negative | 4486724 - 4487422 | 26313.7 |
| cell-envelope stress modulator cpxp | EC55989_RS22425 | P0AE86 | Positive | 4487572 - 4488072 | 18966.4 |
| cdf family cation-efflux transporter fief | EC55989_RS22430 | A7ZUC8 | Positive | 4488221 - 4489123 | 32929.2 |
| 6-phosphofructokinase | EC55989_RS22435 | A7ZUC9 | Positive | 4489304 - 4490266 | 34844.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





