Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | EC55989_RS21660 | B7L8B3 | Positive | 4333773 - 4335623 | 65521.4 |
| threonine ammonia-lyase, biosynthetic | EC55989_RS21665 | P04968 | Positive | 4335626 - 4337170 | 56187.4 |
| hth-type transcriptional activator ilvy | EC55989_RS21670 | P05827 | Negative | 4337222 - 4338115 | 33206.3 |
| ketol-acid reductoisomerase | EC55989_RS21675 | B7L8B5 | Positive | 4338265 - 4339740 | 54102.2 |
| peptidylprolyl isomerase ppic | EC55989_RS21680 | P0A9L7 | Negative | 4339827 - 4340108 | 10232.6 |
| type ii toxin-antitoxin system pemk/mazf family toxin | EC55989_RS21685 | P56259 | Negative | 4340307 - 4340756 | 16869.4 |
| dna helicase rep | EC55989_RS21690 | P09980 | Positive | 4340973 - 4342994 | 77044.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | EC55989_RS21695 | B7L8C0 | Negative | 4343041 - 4344525 | 54900.5 |
| atp-dependent rna helicase rhlb | EC55989_RS21700 | A7ZTY2 | Negative | 4344659 - 4345924 | 47128.7 |
| thioredoxin trxa | EC55989_RS21705 | P0AA27 | Positive | 4346055 - 4346384 | 11807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





