Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | EC55989_RS20555 | P37387 | Positive | 4101707 - 4102699 | 35722.1 |
| d-xylose abc transporter atp-binding protein | EC55989_RS20560 | P37388 | Positive | 4102777 - 4104318 | 56488.0 |
| xylose abc transporter permease xylh | EC55989_RS20565 | P0AGI6 | Positive | 4104296 - 4105477 | 41105.5 |
| d-xylose utilization transcriptional activator xylr | EC55989_RS20570 | P0ACI5 | Positive | 4105555 - 4106733 | 44887.7 |
| protein bax | EC55989_RS20575 | P27297 | Negative | 4106929 - 4107753 | 30839.3 |
| alpha-amylase | EC55989_RS20580 | P25718 | Positive | 4108073 - 4110103 | 75749.6 |
| valine--pyruvate transaminase | EC55989_RS20585 | P09053 | Positive | 4110281 - 4111534 | 46714.9 |
| 4fe-4s binding protein | EC55989_RS20595 | P56256 | Negative | 4111686 - 4112159 | 17435.1 |
| iclr family transcriptional regulator yiaj | EC55989_RS20600 | P37671 | Negative | 4112261 - 4113109 | 31095.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | EC55989_RS20605 | B7L6Z1 | Positive | 4113310 - 4114308 | 36588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





