Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid resistance transcriptional activator gadx | EC55989_RS20250 | Q83PR0 | Negative | 4030094 - 4030918 | 31455.3 |
| glutamate decarboxylase | EC55989_RS20255 | P69909 | Negative | 4031288 - 4032688 | 52688.0 |
| cytochrome c peroxidase | EC55989_RS20260 | P37197 | Negative | 4032899 - 4034296 | 51543.3 |
| alpha,alpha-trehalase | EC55989_RS20265 | B7L603 | Positive | 4034701 - 4036350 | 63787.2 |
| response regulator transcription factor | EC55989_RS20270 | P37640 | Negative | 4036401 - 4037003 | 22605.6 |
| lysr family transcriptional regulator | EC55989_RS20275 | P37641 | Positive | 4037523 - 4038422 | 33275.5 |
| inner membrane protein yhjd | EC55989_RS20280 | P37642 | Positive | 4038471 - 4039484 | 37902.6 |
| mfs transporter | EC55989_RS20285 | P37643 | Positive | 4039895 - 4041217 | 47210.9 |
| asma family protein | EC55989_RS20290 | P37645 | Negative | 4041451 - 4043511 | 74461.8 |
| cyclic-guanylate-specific phosphodiesterase | EC55989_RS20295 | P37646 | Negative | 4043581 - 4044348 | 29602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





