Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | EC55989_RS20200 | P37195 | Positive | 4019791 - 4020321 | 20409.5 |
| mgtc/sapb family protein | EC55989_RS20205 | P0AFV3 | Negative | 4020363 - 4021010 | 23228.9 |
| acid-activated periplasmic chaperone hdeb | EC55989_RS20210 | P0AET3 | Negative | 4021074 - 4021400 | 12043.5 |
| acid-activated periplasmic chaperone hdea | EC55989_RS20215 | P0AET0 | Negative | 4021516 - 4021848 | 11858.2 |
| acid-resistance protein hded | EC55989_RS20220 | P0AET6 | Positive | 4022103 - 4022675 | 20904.6 |
| acid resistance transcriptional activator gade | EC55989_RS20225 | P63206 | Positive | 4023474 - 4024001 | 20600.6 |
| hypothetical protein | EC55989_RS20230 | Not Available | Negative | 4024002 - 4024280 | 9815.82 |
| multidrug transporter subunit mdte | EC55989_RS20235 | P37636 | Positive | 4024388 - 4025497 | 39309.4 |
| multidrug efflux pump rnd permease mdtf | EC55989_RS20240 | Q8X3J5 | Positive | 4025522 - 4028635 | 111555.0 |
| acid resistance transcriptional activator gadw | EC55989_RS20245 | P63202 | Negative | 4028998 - 4029726 | 28025.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





