Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikc | EC55989_RS19885 | P0AFB0 | Positive | 3953831 - 3954664 | 30363.8 |
| nickel import atp-binding protein nikd | EC55989_RS19890 | P33593 | Positive | 3954664 - 3955428 | 26822.1 |
| nickel import atp-binding protein nike | EC55989_RS19895 | Q3YW48 | Positive | 3955425 - 3956231 | 29709.5 |
| nickel-responsive transcriptional regulator nikr | EC55989_RS19900 | A7ZT19 | Positive | 3956237 - 3956638 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | EC55989_RS19905 | Not Available | Negative | 3956758 - 3957117 | 13403.0 |
| type ii toxin-antitoxin system hica family toxin | EC55989_RS19910 | Not Available | Negative | 3957114 - 3957344 | 8420.25 |
| abc transporter permease | EC55989_RS19915 | P0AGH1 | Negative | 3957448 - 3958572 | 41064.2 |
| ribosome-associated atpase/putative transporter rbba | EC55989_RS19920 | P37624 | Negative | 3958572 - 3961307 | 100793.0 |
| hlyd family secretion protein | EC55989_RS19925 | P37626 | Negative | 3961304 - 3962371 | 38858.6 |
| protein yhiy | EC55989_RS29705 | P0DSG8 | Negative | 3962434 - 3962547 | 4153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





