Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | EC55989_RS19680 | P46859 | Negative | 3915484 - 3916011 | 19544.4 |
| gluconate operon transcriptional repressor gntr | EC55989_RS19685 | P0ACP6 | Negative | 3916150 - 3917145 | 36371.2 |
| quercetin 2,3-dioxygenase | EC55989_RS19690 | P46852 | Negative | 3917369 - 3918064 | 26341.9 |
| oxidoreductase | EC55989_RS19695 | P46853 | Negative | 3918187 - 3919224 | 38767.1 |
| n-acetyltransferase | EC55989_RS19700 | P46854 | Positive | 3919556 - 3920044 | 18794.6 |
| hcp1 family type vi secretion system effector | EC55989_RS19705 | Not Available | Positive | 3920281 - 3921459 | 44263.9 |
| protein yrha | EC55989_RS19710 | P46856 | Positive | 3921456 - 3921950 | 19017.5 |
| protein yrhd | EC55989_RS28990 | P58037 | Positive | 3922045 - 3922200 | 6027.24 |
| yrhb family protein | EC55989_RS19715 | P46857 | Positive | 3922400 - 3922684 | 10613.4 |
| gamma-glutamyltransferase | EC55989_RS19720 | Not Available | Negative | 3922722 - 3924464 | 61817.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





