Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | EC55989_RS18090 | P42630 | Negative | 3611861 - 3613225 | 48466.5 |
| enamine/imine deaminase | EC55989_RS18095 | P0AGL3 | Negative | 3613297 - 3613686 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EC55989_RS18100 | P42632 | Negative | 3613700 - 3615994 | 85940.4 |
| propionate kinase | EC55989_RS18105 | Q8XAF1 | Negative | 3616028 - 3617236 | 43386.7 |
| threonine/serine transporter tdcc | EC55989_RS18110 | B7UJ20 | Negative | 3617262 - 3618593 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EC55989_RS18115 | P0AGF8 | Negative | 3618615 - 3619604 | 35234.5 |
| transcriptional regulator tdca | EC55989_RS18120 | P0ACQ8 | Negative | 3619703 - 3620641 | 34540.9 |
| transcriptional activator tdcr | EC55989_RS29460 | P11866 | Positive | 3620956 - 3621174 | 8574.2 |
| protein yhab | EC55989_RS18130 | P11865 | Positive | 3621430 - 3621969 | 20524.5 |
| yhac family protein | EC55989_RS18135 | P11864 | Positive | 3621991 - 3623178 | 45442.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





