Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | EC55989_RS17315 | Q8VPC3 | Negative | 3453788 - 3454159 | 13573.3 |
| type ii secretion system minor pseudopilin gsph | EC55989_RS17320 | P45774 | Negative | 3454156 - 3454719 | 21155.7 |
| type ii secretion system major pseudopilin gspg | EC55989_RS17325 | P45773 | Negative | 3454723 - 3455178 | 16663.8 |
| type ii secretion system inner membrane protein gspf | EC55989_RS17330 | P45780 | Negative | 3455195 - 3456418 | 44912.6 |
| type ii secretion system atpase gspe | EC55989_RS17335 | P37093 | Negative | 3456418 - 3457911 | 55207.8 |
| type ii secretion system secretin gspd | EC55989_RS17340 | E3PJ86 | Negative | 3457911 - 3459971 | 74192.1 |
| type ii secretion system protein gspc | EC55989_RS17345 | E3PJ87 | Negative | 3460001 - 3460960 | 35759.2 |
| type ii secretion system pilot lipoprotein gsps-beta | EC55989_RS17350 | Q46835 | Negative | 3460978 - 3461388 | 14670.8 |
| prepilin peptidase pppa | EC55989_RS17355 | E3PJ89 | Negative | 3461454 - 3462263 | 29525.9 |
| lipoprotein metalloprotease ssle | EC55989_RS17360 | E3PJ90 | Negative | 3462403 - 3466968 | 168273.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





