Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | EC55989_RS17270 | Not Available | Positive | 3447770 - 3447991 | 8455.26 |
| type iv toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin cbea | EC55989_RS17275 | Not Available | Positive | 3448071 - 3448448 | 13748.4 |
| ta system toxin cbta family protein | EC55989_RS17280 | Not Available | Positive | 3448495 - 3448872 | 13857.5 |
| hypothetical protein | EC55989_RS28945 | Not Available | Positive | 3448869 - 3449066 | 7078.41 |
| duf957 domain-containing protein | EC55989_RS28950 | Not Available | Positive | 3449094 - 3449291 | 7492.92 |
| duf4942 domain-containing protein | EC55989_RS17290 | Not Available | Positive | 3449376 - 3450218 | 32578.3 |
| gspm family type ii secretion system protein yghd | EC55989_RS17295 | Q46832 | Negative | 3450499 - 3451035 | 20366.6 |
| type ii secretion system protein gspl | EC55989_RS17300 | Q46833 | Negative | 3451037 - 3452215 | 44235.4 |
| type ii secretion system minor pseudopilin gspk | EC55989_RS17305 | P15750 | Negative | 3452212 - 3453189 | 36602.4 |
| type ii secretion system minor pseudopilin gspj | EC55989_RS17310 | A0A4C3GMC1 | Negative | 3453192 - 3453791 | 22193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





