Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EC55989_RS17135 | Not Available | Negative | 3420014 - 3422671 | 97954.4 |
| type vi secretion system effector hcp | EC55989_RS17140 | Not Available | Negative | 3422840 - 3423331 | 18681.9 |
| ompa family protein | EC55989_RS17145 | Not Available | Negative | 3423337 - 3425067 | 64493.8 |
| type vi secretion system protein tssl, short form | EC55989_RS17150 | Not Available | Negative | 3425070 - 3425723 | 24431.3 |
| type vi secretion system baseplate subunit tssk | EC55989_RS17155 | Not Available | Negative | 3425720 - 3427057 | 49872.1 |
| type vi secretion system contractile sheath large subunit | EC55989_RS17160 | Not Available | Negative | 3427073 - 3428617 | 57727.7 |
| type vi secretion system contractile sheath small subunit | EC55989_RS17165 | Not Available | Negative | 3428639 - 3429136 | 18520.3 |
| duf4222 domain-containing protein | EC55989_RS17170 | Not Available | Positive | 3429643 - 3429834 | 7455.92 |
| hypothetical protein | EC55989_RS17175 | Not Available | Negative | 3429887 - 3430120 | 8906.18 |
| hypothetical protein | EC55989_RS17180 | Not Available | Negative | 3430216 - 3430839 | 23911.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





