Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system vgr family protein | EC55989_RS16940 | Q9I737 | Negative | 3379980 - 3381962 | 73709.2 |
| type vi secretion system baseplate subunit tssg | EC55989_RS16945 | Not Available | Negative | 3381975 - 3382907 | 35417.2 |
| type vi secretion system baseplate subunit tssf | EC55989_RS16950 | Q9I744 | Negative | 3382898 - 3384700 | 68629.8 |
| hypothetical protein | EC55989_RS16955 | Not Available | Negative | 3384693 - 3385115 | 16133.9 |
| type vi secretion system protein aaic/hcp2 | EC55989_RS16960 | Not Available | Negative | 3385125 - 3385631 | 18801.5 |
| type vi secretion system contractile sheath large subunit | EC55989_RS16965 | Not Available | Negative | 3385641 - 3387119 | 55206.3 |
| type vi secretion system contractile sheath small subunit | EC55989_RS16970 | Not Available | Negative | 3387122 - 3387598 | 17937.2 |
| is4-like element isvsa5 family transposase | EC55989_RS16975 | Not Available | Positive | 3388044 - 3389252 | 46076.1 |
| hypothetical protein | EC55989_RS26980 | Not Available | Positive | 3389332 - 3390348 | 38627.7 |
| hypothetical protein | EC55989_RS29670 | Not Available | Negative | 3390375 - 3391057 | 23470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





