Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannitol transporter subunit iicb | EC55989_RS16585 | P69827 | Negative | 3306067 - 3307455 | 48973.2 |
| pts mannitol transporter subunit iia | EC55989_RS16590 | P69825 | Negative | 3307483 - 3307926 | 16047.1 |
| transketolase | EC55989_RS16595 | P27302 | Negative | 3308240 - 3310231 | 72215.7 |
| metalloprotease loip | EC55989_RS16600 | P25894 | Positive | 3310509 - 3311267 | 26814.9 |
| agmatinase | EC55989_RS16605 | B7LFJ6 | Negative | 3311473 - 3312393 | 33543.9 |
| hypothetical protein | EC55989_RS16610 | Not Available | Negative | 3312529 - 3313260 | 26357.7 |
| biosynthetic arginine decarboxylase | EC55989_RS16615 | Q8XCX9 | Negative | 3313406 - 3315382 | 73890.6 |
| acid stress response protein yqgb | EC55989_RS16620 | P64569 | Negative | 3315391 - 3315522 | 4859.08 |
| protein yqgg | EC55989_RS29920 | P0DSG2 | Negative | 3315616 - 3315759 | 5220.17 |
| protein yqgd | EC55989_RS29925 | P46879 | Negative | 3315870 - 3316121 | 9562.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





