Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-proton symporter arae | EC55989_RS16040 | P0AE25 | Negative | 3197916 - 3199334 | 51687.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EC55989_RS16045 | P37769 | Negative | 3199649 - 3200410 | 27057.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EC55989_RS16050 | B7LF20 | Negative | 3200440 - 3201276 | 31093.1 |
| acetyl-coa c-acetyltransferase | EC55989_RS16055 | Q46939 | Negative | 3201563 - 3202744 | 41026.2 |
| amino acid permease | EC55989_RS16060 | P63342 | Positive | 3202999 - 3204228 | 45101.9 |
| helix-turn-helix transcriptional regulator | EC55989_RS16065 | Q46941 | Positive | 3204688 - 3205320 | 24445.4 |
| transcriptional regulator | EC55989_RS16070 | Q46942 | Positive | 3205654 - 3206463 | 30838.8 |
| protein yqej | EC55989_RS16075 | Q46943 | Positive | 3206456 - 3206938 | 18720.5 |
| hypothetical protein | EC55989_RS28245 | C1P613 | Negative | 3206971 - 3207051 | 3203.84 |
| protein yqek | EC55989_RS16080 | P77136 | Negative | 3207087 - 3207512 | 16286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





