Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycf | EC55989_RS15375 | P16432 | Negative | 3057834 - 3058376 | 20330.4 |
| formate hydrogenlyase subunit hyce | EC55989_RS15380 | P16431 | Negative | 3058386 - 3060095 | 64970.1 |
| formate hydrogenlyase subunit hycd | EC55989_RS15385 | P16430 | Negative | 3060113 - 3061036 | 33031.4 |
| formate hydrogenlyase subunit 3 | EC55989_RS15390 | P16429 | Negative | 3061039 - 3062865 | 64129.2 |
| formate hydrogenlyase subunit hycb | EC55989_RS15395 | P0AAK2 | Negative | 3062862 - 3063473 | 21888.4 |
| formate hydrogenlyase regulator hyca | EC55989_RS15405 | P0AEV5 | Negative | 3063598 - 3064059 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | EC55989_RS15410 | P0A701 | Positive | 3064270 - 3064620 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | EC55989_RS15415 | P0AAN4 | Positive | 3064624 - 3065496 | 31566.8 |
| hydrogenase 3 maturation protein hypc | EC55989_RS15420 | P0AAM5 | Positive | 3065487 - 3065759 | 9732.58 |
| hydrogenase formation protein hypd | EC55989_RS15425 | P24192 | Positive | 3065759 - 3066880 | 41366.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





