Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | EC55989_RS13690 | P52599 | Negative | 2714557 - 2715720 | 42587.9 |
| acid-sensing system dna-binding response regulator evga | EC55989_RS13695 | P0ACZ6 | Positive | 2716136 - 2716750 | 22691.5 |
| acid-sensing system histidine kinase evgs | EC55989_RS13700 | P30855 | Positive | 2716755 - 2720348 | 134744.0 |
| coa:oxalate coa-transferase | EC55989_RS13705 | P76518 | Negative | 2720404 - 2721549 | 41673.2 |
| transporter yfdv | EC55989_RS13710 | P0AA51 | Negative | 2721623 - 2722567 | 33617.9 |
| oxalyl-coa decarboxylase | EC55989_RS13715 | P0AFI1 | Negative | 2722637 - 2724331 | 60630.9 |
| formyl-coa transferase | EC55989_RS13720 | A7ZPI2 | Negative | 2724385 - 2725635 | 45830.7 |
| yfdx family protein | EC55989_RS13725 | P76520 | Negative | 2726148 - 2726780 | 22907.4 |
| colanic acid biosynthesis lipoprotein ypdi | EC55989_RS13730 | O32528 | Positive | 2727076 - 2727351 | 10210.5 |
| yfdy family protein | EC55989_RS13740 | P76521 | Negative | 2727428 - 2727670 | 8897.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





