Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (quinone) | EC55989_RS12695 | B7LAN4 | Negative | 2518568 - 2520214 | 60266.1 |
| microcin j25 efflux abc transporter yoji | EC55989_RS12700 | P33941 | Negative | 2520432 - 2522075 | 61604.4 |
| dna oxidative demethylase alkb | EC55989_RS12705 | P05050 | Negative | 2522151 - 2522801 | 24030.7 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EC55989_RS12710 | P06134 | Negative | 2522801 - 2523865 | 39307.0 |
| fad:protein fmn transferase apbe | EC55989_RS12715 | P0AB86 | Negative | 2523939 - 2524994 | 38593.1 |
| porin ompc | EC55989_RS12720 | Q8XE41 | Negative | 2525106 - 2526209 | 40441.4 |
| phosphotransferase rcsd | EC55989_RS12735 | P39838 | Positive | 2526948 - 2529620 | 100354.0 |
| response regulator transcription factor rcsb | EC55989_RS12740 | P69409 | Positive | 2529637 - 2530287 | 23672.0 |
| two-component system sensor histidine kinase rcsc | EC55989_RS12745 | P0DMC5 | Negative | 2530487 - 2533336 | 106513.0 |
| yfap family protein | EC55989_RS12750 | P76462 | Negative | 2533611 - 2534387 | 28277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





