Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter permease yehy | EC55989_RS12270 | P33361 | Negative | 2432900 - 2434057 | 41146.2 |
| glycine betaine abc transporter substrate-binding protein osmf | EC55989_RS12275 | P33362 | Negative | 2434064 - 2434981 | 32553.0 |
| beta-glucosidase bglx | EC55989_RS12280 | P33363 | Negative | 2435192 - 2437489 | 83586.8 |
| d-lactate dehydrogenase | EC55989_RS12285 | P06149 | Positive | 2437685 - 2439400 | 64666.0 |
| d-alanyl-d-alanine endopeptidase | EC55989_RS12290 | P0AFI5 | Negative | 2439438 - 2440370 | 33855.3 |
| yip1 family protein | EC55989_RS12295 | P0AD18 | Negative | 2440544 - 2441131 | 21692.0 |
| deda family protein | EC55989_RS12300 | P33366 | Positive | 2441301 - 2441879 | 21445.9 |
| sdr family oxidoreductase | EC55989_RS12305 | P33368 | Negative | 2442009 - 2442770 | 26964.4 |
| multidrug resistance outer membrane protein mdtq | EC55989_RS12310 | Q83KF5 | Negative | 2442823 - 2444259 | 52184.0 |
| small membrane protein yohp | EC55989_RS12315 | Not Available | Positive | 2444483 - 2444566 | 3092.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





