Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small membrane protein yoai | EC55989_RS10100 | Q8XDT5 | Negative | 2022511 - 2022615 | 3771.77 |
| duf441 domain-containing protein | EC55989_RS10105 | B7L6R4 | Positive | 2022785 - 2023231 | 15228.6 |
| dna-binding transcriptional regulator nimr | EC55989_RS10110 | P76241 | Negative | 2023188 - 2024009 | 30472.2 |
| 2-nitroimidazole transporter | EC55989_RS10115 | P76242 | Positive | 2024106 - 2025287 | 41264.9 |
| duf488 domain-containing protein | EC55989_RS10120 | P76243 | Positive | 2025342 - 2025689 | 13340.9 |
| duf333 domain-containing lipoprotein yoaf | EC55989_RS10125 | P64494 | Negative | 2025711 - 2025965 | 8904.77 |
| diguanylate cyclase dgcp | EC55989_RS10130 | P76245 | Positive | 2026148 - 2027173 | 38507.7 |
| yoak family small membrane protein | EC55989_RS10135 | C1P602 | Positive | 2027206 - 2027304 | 3458.45 |
| protein yoaj | EC55989_RS28040 | Not Available | Positive | 2027307 - 2027381 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | EC55989_RS10140 | P64487 | Negative | 2027440 - 2027688 | 8671.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





