Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein sapf | EC55989_RS07525 | P0AAH9 | Negative | 1493555 - 1494361 | 30571.5 |
| peptide abc transporter atp-binding protein sapd | EC55989_RS07530 | P0AAH6 | Negative | 1494363 - 1495355 | 37662.9 |
| peptide abc transporter permease sapc | EC55989_RS07535 | P0AGH6 | Negative | 1495355 - 1496245 | 31550.0 |
| putrescine export abc transporter permease sapb | EC55989_RS07540 | P0AGH4 | Negative | 1496232 - 1497197 | 36040.2 |
| abc transporter substrate-binding protein sapa | EC55989_RS07545 | Q47622 | Negative | 1497194 - 1498837 | 61568.2 |
| ymja family protein | EC55989_RS07555 | P0ACV8 | Negative | 1499149 - 1499394 | 9307.77 |
| putrescine/proton symporter puup | EC55989_RS07560 | P76037 | Negative | 1499528 - 1500913 | 50855.9 |
| hypothetical protein | EC55989_RS28665 | P0DPO2 | Negative | 1500903 - 1501067 | 5997.33 |
| glutamate-putrescine ligase | EC55989_RS07565 | P78061 | Negative | 1501216 - 1502634 | 53210.3 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | EC55989_RS07570 | P76038 | Positive | 1502846 - 1503610 | 27984.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





