Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhak | EC55989_RS06705 | P76015 | Negative | 1345602 - 1346672 | 38251.4 |
| dihydroxyacetone kinase operon transcriptional regulator dhar | EC55989_RS06710 | P76016 | Positive | 1346900 - 1348819 | 70503.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC55989_RS06715 | P76017 | Negative | 1348919 - 1351786 | 99620.5 |
| redox-regulated atpase ychf | EC55989_RS06725 | P0ABU3 | Negative | 1352555 - 1353646 | 39669.6 |
| aminoacyl-trna hydrolase | EC55989_RS06730 | A7ZKX7 | Negative | 1353763 - 1354347 | 21083.5 |
| stress-induced protein ychh | EC55989_RS06735 | P0AB51 | Positive | 1354625 - 1354903 | 10486.9 |
| c4-dicarboxylic acid transporter daua | EC55989_RS06740 | P0AFR3 | Negative | 1354958 - 1356637 | 59432.8 |
| ribose-phosphate diphosphokinase | EC55989_RS06745 | P0A719 | Negative | 1356762 - 1357709 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EC55989_RS06750 | B7LGW9 | Negative | 1357860 - 1358711 | 30963.2 |
| lipoprotein insertase outer membrane protein lolb | EC55989_RS06755 | A7ZKY3 | Negative | 1358711 - 1359334 | 23552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





