Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine transaminase | EC55989_RS04930 | B7LD99 | Positive | 1019078 - 1020166 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EC55989_RS04935 | A7ZJZ7 | Positive | 1020237 - 1021520 | 46098.5 |
| metallopeptidase ycal | EC55989_RS04940 | P43674 | Positive | 1021689 - 1022453 | 26768.7 |
| (d)cmp kinase | EC55989_RS04945 | A7ZJZ9 | Positive | 1022626 - 1023309 | 24747.8 |
| 30s ribosomal protein s1 | EC55989_RS04950 | P0AG69 | Positive | 1023420 - 1025093 | 61161.5 |
| integration host factor subunit beta | EC55989_RS04955 | A7ZK01 | Positive | 1025253 - 1025537 | 10651.8 |
| comec family protein | EC55989_RS04960 | P37443 | Positive | 1025744 - 1028008 | 84661.1 |
| lipid a abc transporter atp-binding protein/permease msba | EC55989_RS04965 | P60753 | Positive | 1028045 - 1029793 | 64464.6 |
| tetraacyldisaccharide 4'-kinase | EC55989_RS04970 | B7LE13 | Positive | 1029790 - 1030776 | 35565.3 |
| crosslink repair dna glycosylase ycaq | EC55989_RS04975 | P75843 | Positive | 1030813 - 1032045 | 47642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





