Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate family cysteine hydrolase ycac | EC55989_RS04880 | P21367 | Negative | 1006357 - 1006983 | 23119.6 |
| mfs transporter | EC55989_RS04885 | B7UMY7 | Positive | 1007297 - 1008445 | 41462.2 |
| apc family permease | EC55989_RS04890 | P75835 | Positive | 1008655 - 1010085 | 52527.6 |
| lysr family transcriptional regulator | EC55989_RS04895 | P75836 | Negative | 1010086 - 1010994 | 34288.4 |
| nad(p)h oxidoreductase | EC55989_RS04900 | P43340 | Positive | 1011094 - 1011684 | 23067.3 |
| pyruvate formate lyase 1-activating protein | EC55989_RS04905 | P0A9N6 | Negative | 1011766 - 1012506 | 28205.9 |
| formate c-acetyltransferase | EC55989_RS04910 | P09373 | Negative | 1012698 - 1014980 | 85355.0 |
| formate transporter foca | EC55989_RS28590 | P0AC25 | Negative | 1015035 - 1015892 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | EC55989_RS04920 | P75838 | Negative | 1016297 - 1018057 | 65655.0 |
| duf421 domain-containing protein | EC55989_RS04925 | P75839 | Positive | 1018187 - 1018879 | 26283.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





