Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 55989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1273428 bp
Thymine Count
1270172 bp
Guanine Count
1303042 bp
Cytosine Count
1308220 bp
Genome Length
5154862 bp
Protein-coding Genes
4634 genes
Non-Coding Genes
433 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ybjm | EC55989_RS04625 | P64440 | Positive | 951464 - 951841 | 14204.0 |
| glutaredoxin 1 | EC55989_RS04630 | P68688 | Negative | 951871 - 952128 | 9685.35 |
| duf1418 family protein | EC55989_RS04635 | P46119 | Positive | 952288 - 952575 | 10521.4 |
| nitroreductase nfsa | EC55989_RS04640 | P17117 | Positive | 952559 - 953281 | 26735.1 |
| 30s ribosomal protein s6--l-glutamate ligase | EC55989_RS04645 | B7UMU4 | Positive | 953342 - 954244 | 32438.5 |
| ybjn domain-containing protein | EC55989_RS04650 | P0AAY8 | Positive | 954332 - 954808 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | EC55989_RS04660 | P31133 | Positive | 955160 - 956272 | 40841.7 |
| putrescine abc transporter atp-binding subunit potg | EC55989_RS04665 | P31134 | Positive | 956367 - 957500 | 41956.3 |
| hypothetical protein | EC55989_RS04670 | P31135 | Positive | 957510 - 958462 | 35796.9 |
| putrescine abc transporter permease poti | EC55989_RS04675 | P0AFL2 | Positive | 958459 - 959304 | 30523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





