Vibrio atlanticus

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio atlanticus is a mesophilic, heterotrophic bacterium that inhabits aquatic environments. This organism is characterized by its rod shape and is classified as gram-negative, possessing two membranes. It typically exists as single cells and is noted for being free-living, indicating that it does not rely on a host organism for survival. Vibrio atlanticus has a facultative oxygen requirement, allowing it to thrive in both aerobic and anaerobic conditions. This adaptability contributes to its ecological versatility in diverse aquatic habitats. The bacterium is non-motile, despite the presence of flagella, which suggests that while it has the potential for movement, it may not actively use this feature in its ecological niche. With a genetic structure comprising one replicon, Vibrio atlanticus demonstrates a streamlined genome organization that may facilitate efficient replication and adaptation to its environment. The accession number NC_011744.2 provides a reference for further genomic studies related to this species. From an ecological perspective, the free-living nature of Vibrio atlanticus underscores its role in aquatic ecosystems, potentially contributing to nutrient cycling and the microbial community dynamics in its habitat. Understanding its biological traits and ecological functions can enhance our knowledge of microbial interactions and the health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio atlanticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio atlanticus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio atlanticus chromosome 2, complete sequence.

Gene Summary

Adenine Count

471870 bp

Thymine Count

472410 bp

Guanine Count

364604 bp

Cytosine Count

366631 bp

Genome Length

1675515 bp

Protein-coding Genes

1412 genes

Non-Coding Genes

20 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murr/rpir family transcriptional regulatorVS_RS14965Not AvailableNegative41423 - 4228631597.4
amino acid deaminaseVS_RS14970Not AvailableNegative42404 - 4367846408.0
n-acyl-d-amino-acid deacylase family proteinVS_RS14975Not AvailablePositive43855 - 4528851763.5
rida family proteinVS_RS14980Not AvailablePositive45409 - 4580114151.0
sodium:solute symporter family proteinVS_RS14985Not AvailablePositive46007 - 4752153465.2
sugar kinaseVS_RS14990Not AvailablePositive47652 - 4859334623.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseVS_RS14995Not AvailablePositive48619 - 4925422841.0
family 20 glycosylhydrolaseVS_RS15000Not AvailablePositive49412 - 5186292527.9
bor family proteinVS_RS15005Not AvailableNegative52087 - 5238310561.9
atp-binding proteinVS_RS15010Not AvailableNegative52507 - 5382650164.6

Displaying genes 31 – 40 of 1432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.