Limosilactobacillus fermentum IFO 3956

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Limosilactobacillus

Description

Limosilactobacillus fermentum IFO 3956 is a Gram-positive, rod-shaped bacterium that typically arranges itself in chains. This species is classified as a facultative anaerobe, indicating its ability to grow in both the presence and absence of oxygen, which potentially allows it to thrive in diverse environments. L. fermentum IFO 3956 is found in multiple habitats, suggesting a versatile ecological niche that may include fermented foods, the gastrointestinal tracts of various animals, and other environments conducive to lactic acid bacteria. Its ability to ferment sugars and produce lactic acid is consistent with the metabolic characteristics typical of this genus, which plays a significant role in food fermentation processes and may contribute to food preservation. The diverse habitats of L. fermentum IFO 3956 imply that this microbe could be integral to various microbial communities, possibly influencing the fermentation dynamics and the overall health of the ecosystems it inhabits. Its chain formation may also suggest a potential for cooperative interactions within these communities, enhancing its survival and functional roles in fermentation and microbial ecology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLimosilactobacillus
SpeciesLimosilactobacillus fermentum
StrainIFO 3956

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Limosilactobacillus fermentum IFO 3956
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limosilactobacillus fermentum IFO 3956


Gene Summary

Adenine Count

515364 bp

Thymine Count

503147 bp

Guanine Count

542108 bp

Cytosine Count

538065 bp

Genome Length

2098685 bp

Protein-coding Genes

2049 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative major head proteinLAF_RS02620Not Available+538544 - 53882811107.3
hypothetical proteinLAF_RS02625Not Available+538872 - 5390637332.72
hypothetical proteinLAF_RS11325Not Available+539172 - 5393396094.08
AttlNot AvailableNot Available+539326 - 539340Not Available
Phage integraseLAF_RS02630Not Available-539413 - 54053442623.8
hypothetical proteinLAF_RS02635Not Available-540612 - 54113919205.8
Gp35LAF_RS02640Not Available-541146 - 54160417906.1
Orf047LAF_RS02645Not Available-541617 - 54195212620.7
Xre family transcriptional regulatorLAF_RS02650Not Available+542086 - 5423228964.64
hypothetical proteinLAF_RS10535Not Available+542334 - 54265412215.7

Displaying genes 1 – 10 of 2177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

354 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 354 metabolites