Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella halifaxensis |
| Strain | HAW-EB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Marine- Sediment |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1451795 bp
Thymine Count
1444394 bp
Guanine Count
1166162 bp
Cytosine Count
1164566 bp
Genome Length
5226917 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | SHAL_RS00120 | Not Available | Negative | 28246 - 29655 | 51587.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SHAL_RS00125 | Not Available | Negative | 29663 - 30943 | 47562.0 |
| methionyl-trna formyltransferase | SHAL_RS00130 | Not Available | Negative | 30950 - 31915 | 34781.4 |
| peptide deformylase | SHAL_RS00135 | Not Available | Negative | 31920 - 32432 | 19273.2 |
| lysm peptidoglycan-binding domain-containing protein | SHAL_RS00140 | Not Available | Positive | 32569 - 33669 | 40311.8 |
| dna-processing protein dpra | SHAL_RS00145 | Not Available | Positive | 33823 - 34842 | 36452.8 |
| duf494 family protein | SHAL_RS00150 | Not Available | Positive | 34845 - 35318 | 18486.1 |
| collagenase | SHAL_RS00155 | Not Available | Negative | 35594 - 37366 | 66496.6 |
| topoisomerase dna-binding c4 zinc finger domain-containing protein | SHAL_RS00160 | Not Available | Positive | 37503 - 38066 | 20770.9 |
| l-threonylcarbamoyladenylate synthase | SHAL_RS00165 | Not Available | Positive | 38154 - 38717 | 19750.8 |
Pathways
1443 pathways
Health Effects
No health effects information available for this bacterium.
