Gluconacetobacter diazotrophicus PA1 5

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Gluconacetobacter

Description

Gluconacetobacter diazotrophicus PA1 is a Gram-negative, rod-shaped bacterium that is characterized by its symbiotic relationship with host organisms. It is an aerobic bacterium that requires oxygen for its metabolic processes and is categorized as a diazotroph, meaning it can fix atmospheric nitrogen. This capability is crucial for its role in promoting plant growth, particularly in association with sugarcane and other crops. The cellular arrangement of G. diazotrophicus PA1 is primarily in singles, and it possesses two membranes, typical of Gram-negative bacteria. Notably, it has a flagella, which is indicative of its motility; however, the organism itself is described as non-motile. The optimal growth temperature for this bacterium is around 30 degrees Celsius, placing it within the mesophilic temperature range. With only one replicon, G. diazotrophicus PA1 has a streamlined genetic structure that may facilitate its adaptation to specific ecological niches. Its ability to engage in a biotic relationship with its host highlights its ecological significance, as it contributes to nitrogen availability in the soil, thereby enhancing nutrient cycling. In summary, G. diazotrophicus PA1 exemplifies the complex interactions between microorganisms and their environments, particularly in agricultural settings where nitrogen fixation is vital for sustainable crop production. Its traits underscore its potential utility in biofertilization and other agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGluconacetobacter
SpeciesGluconacetobacter diazotrophicus
StrainPA1 5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Gluconacetobacter diazotrophicus PA1 5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceDiazotroph
PathogenicityNot Available

Genome Summary

Gluconacetobacter diazotrophicus PA1 5, complete sequence.

Gene Summary

Adenine Count

664608 bp

Thymine Count

659404 bp

Guanine Count

1305319 bp

Cytosine Count

1314832 bp

Genome Length

3944163 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system relb/dinj family antitoxinGDI_RS05085Not AvailablePositive1073449 - 10737129629.58
Hypothetical proteinGDI_RS05090Not AvailablePositive1073705 - 107404913319.9
Site-specific recombinaseGDI_RS05095Not AvailablePositive1074082 - 107475924967.8
is630 family transposaseGDI_RS18915Not AvailablePositive1074987 - 10751877097.54
TransposaseGDI_RS05100Not AvailablePositive1075224 - 107568517424.0
Issod10, transposase orfaGDI_RS05105Not AvailableNegative1075734 - 107609613607.2
Is1477 transposaseGDI_RS05115Not AvailablePositive1076208 - 107732542725.3
hypothetical proteinGDI_RS05120Not AvailableNegative1077462 - 107867945576.7
WeceGDI_RS05125Not AvailableNegative1078703 - 107994444771.4
Issod10, transposase orfaGDI_RS18920Not AvailablePositive1080151 - 108059716665.8

Displaying genes 21 – 30 of 3762 in total

Metabolites

1676 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 1676 metabolites

Health Effects

No health effects information available for this bacterium.