Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SSED_RS04695 | Not Available | Negative | 1091975 - 1092187 | 7828.48 |
| aminopeptidase n | SSED_RS04700 | Not Available | Negative | 1092423 - 1095062 | 100260.0 |
| penicillin-binding protein activator lpob | SSED_RS04705 | Not Available | Negative | 1095254 - 1095847 | 22106.8 |
| cog3014 family protein | SSED_RS04710 | Not Available | Negative | 1095870 - 1097237 | 50017.5 |
| slyx family protein | SSED_RS04715 | Not Available | Negative | 1097514 - 1097726 | 8152.73 |
| wd40 repeat domain-containing protein | SSED_RS04720 | Not Available | Negative | 1097735 - 1098694 | 34557.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SSED_RS04725 | Not Available | Positive | 1098917 - 1099696 | 27713.7 |
| nucleotide sugar dehydrogenase | SSED_RS04730 | Not Available | Positive | 1099834 - 1101000 | 43369.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | SSED_RS04735 | Not Available | Negative | 1101393 - 1101830 | 15985.3 |
| eama family transporter | SSED_RS04740 | Not Available | Negative | 1101818 - 1102180 | 13710.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
