Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | SSED_RS04610 | Not Available | Positive | 1068380 - 1070104 | 62659.8 |
| hypothetical protein | SSED_RS24795 | Not Available | Negative | 1070910 - 1071062 | 5301.26 |
| lysr family transcriptional regulator | SSED_RS04615 | Not Available | Positive | 1071155 - 1072030 | 32500.7 |
| hypothetical protein | SSED_RS24800 | Not Available | Negative | 1072070 - 1072228 | 5620.47 |
| duf4062 domain-containing protein | SSED_RS04620 | Not Available | Positive | 1072670 - 1073674 | 38324.3 |
| hypothetical protein | SSED_RS24805 | Not Available | Positive | 1073889 - 1074050 | 5820.91 |
| ribose-5-phosphate isomerase rpia | SSED_RS04625 | Not Available | Negative | 1074254 - 1074910 | 23236.1 |
| hd-gyp domain-containing protein | SSED_RS04630 | Not Available | Negative | 1075093 - 1075977 | 32281.6 |
| duf808 domain-containing protein | SSED_RS04635 | Not Available | Positive | 1076201 - 1077133 | 32787.5 |
| lysr family transcriptional regulator | SSED_RS04640 | Not Available | Negative | 1077198 - 1078106 | 33293.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
