Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | SSED_RS04460 | Not Available | Negative | 1028998 - 1029942 | 35728.9 |
| ggdef domain-containing protein | SSED_RS04465 | Not Available | Negative | 1030174 - 1031184 | 38510.1 |
| hypothetical protein | SSED_RS04470 | Not Available | Positive | 1031359 - 1031916 | 21033.1 |
| hypothetical protein | SSED_RS04475 | Not Available | Positive | 1031930 - 1032319 | 14500.3 |
| response regulator transcription factor | SSED_RS04480 | Not Available | Negative | 1032397 - 1033362 | 36858.7 |
| fad-dependent oxidoreductase | SSED_RS04485 | Not Available | Positive | 1033453 - 1035081 | 60530.4 |
| thiamine pyrophosphate-binding protein | SSED_RS04490 | Not Available | Positive | 1035108 - 1036838 | 62225.7 |
| glucosaminidase domain-containing protein | SSED_RS04495 | Not Available | Negative | 1036941 - 1037969 | 38017.4 |
| methionine adenosyltransferase | SSED_RS04500 | Not Available | Negative | 1038223 - 1039374 | 41661.5 |
| transketolase | SSED_RS04505 | Not Available | Positive | 1039848 - 1041839 | 71700.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
