Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | SSED_RS04310 | Not Available | Positive | 990773 - 991225 | 16975.7 |
| glycerol-3-phosphate dehydrogenase/oxidase | SSED_RS04315 | Not Available | Positive | 991322 - 992497 | 43390.7 |
| methyl-accepting chemotaxis protein | SSED_RS04320 | Not Available | Positive | 992641 - 994305 | 59821.3 |
| formate dehydrogenase subunit alpha | SSED_RS04325 | Not Available | Negative | 994387 - 998709 | 157247.0 |
| ion channel | SSED_RS04330 | Not Available | Negative | 999065 - 1000048 | 36991.9 |
| peptide chain release factor 2 | SSED_RS04335 | Not Available | Positive | 1000269 - 1001367 | 41117.9 |
| lysine--trna ligase | SSED_RS04340 | Not Available | Positive | 1001438 - 1002940 | 56881.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | SSED_RS04345 | Not Available | Positive | 1003204 - 1005657 | 91503.7 |
| pseudouridine synthase | SSED_RS04350 | Not Available | Negative | 1005697 - 1006353 | 24606.8 |
| glucosamine-6-phosphate deaminase | SSED_RS04355 | Not Available | Positive | 1006590 - 1007378 | 28571.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
