Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | SSED_RS04010 | Not Available | Positive | 924653 - 925816 | 43220.9 |
| dna topoisomerase iv subunit a | SSED_RS04015 | Not Available | Positive | 925813 - 928086 | 83906.2 |
| bacterioferritin-associated ferredoxin | SSED_RS04020 | Not Available | Negative | 928175 - 928366 | 6977.45 |
| d-2-hydroxyacid dehydrogenase | SSED_RS04025 | Not Available | Negative | 928604 - 929530 | 34853.4 |
| duf3392 domain-containing protein | SSED_RS04030 | Not Available | Positive | 929577 - 929909 | 12255.5 |
| glycerophosphodiester phosphodiesterase | SSED_RS04035 | Not Available | Negative | 930068 - 930763 | 25832.1 |
| mechanosensitive ion channel domain-containing protein | SSED_RS04040 | Not Available | Negative | 930763 - 933963 | 121402.0 |
| dmt family transporter | SSED_RS04045 | Not Available | Negative | 934132 - 935010 | 31746.8 |
| archaetidylserine decarboxylase | SSED_RS04050 | Not Available | Negative | 935010 - 935873 | 31630.3 |
| small ribosomal subunit biogenesis gtpase rsga | SSED_RS04055 | Not Available | Negative | 935907 - 936965 | 38819.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
