Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf494 family protein | SSED_RS00190 | Not Available | Positive | 44674 - 45147 | 18556.1 |
| collagenase | SSED_RS00195 | Not Available | Negative | 45367 - 47139 | 67545.4 |
| type i dna topoisomerase | SSED_RS00200 | Not Available | Positive | 47275 - 47838 | 20966.1 |
| l-threonylcarbamoyladenylate synthase | SSED_RS00205 | Not Available | Positive | 47939 - 48496 | 20089.3 |
| oxygen-dependent coproporphyrinogen oxidase | SSED_RS00210 | Not Available | Positive | 48531 - 49451 | 34942.9 |
| shikimate dehydrogenase | SSED_RS00215 | Not Available | Positive | 49687 - 50502 | 29109.9 |
| duf1488 domain-containing protein | SSED_RS00220 | Not Available | Positive | 50517 - 50795 | 10624.6 |
| gamma carbonic anhydrase family protein | SSED_RS00225 | Not Available | Negative | 50829 - 51383 | 19827.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 51960 - 53502 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 53841 - 56736 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
